Application of GWAS and QTL combined analysis in the genetic pathogenic mechanism underlying age-related macular degeneration

Authors: Zhang Weiran, Wang Sennan, Li Zhiqing, Zhang Yan
DOI: 10.3760/cma.j.cn115989-20230530-00201
   

Citation

Zhang Weiran, Wang Sennan, Li Zhiqing, et al. Application of GWAS and QTL combined analysis in the genetic pathogenic mechanism underlying age-related macular degeneration[J]. Chin J Exp Ophthalmol, 2025, 43(7):651-655. DOI: 10.3760/cma.j.cn115989-20230530-00201.

ABSTRACT                [Download PDF]  [View Full Text]

Age-related macular degeneration (AMD) seriously endangers the visual health of the elderly, and its incidence rate is on the rise in recent years.As the aging of the population intensifies, the incidence rate of AMD will continue to rise.Therefore, it is crucial to explore its genetic pathogenic mechanism.Genome-wide association studies (GWAS) have identified a large number of single nucleotide polymorphisms associated with AMD.However, most of these polymorphisms are located in noncoding regions, and their functions are unclear.Therefore, revealing the regulatory effects of the genetic variations on gene expression, protein levels, and metabolite abundance serves as a powerful tool for deciphering the functions of noncoding variations discovered in GWAS.Furthermore, combining quantitative trait loci (QTLs) with GWAS can effectively explain GWAS data and increase the likelihood of discovering statistically significant genetic variation loci.This review summarizes research on the analysis and integration of GWAS combined with QTL data, aiming to better understand the impact of gene variations on the occurrence and development of AMD, thereby providing new ideas for searching for effective therapeutic targets for AMD.

Genome-wide association study;Quantitative trait locus;Age-related macular degeneration;Retina

Authors Info & Affiliations 

Zhang Weiran
Tianjin Key Laboratory of Retinal Functions and Diseases, Tianjin Branch of National Clinical Research Center for Ocular Disease, Eye Institute and School of Optometry, Tianjin Medical University Eye Hospital, Tianjin 300384, China
Zhang Weiran now works at Medical School of Tianjin University, Tianjin 300072, China
Wang Sennan
Tianjin Key Laboratory of Retinal Functions and Diseases, Tianjin Branch of National Clinical Research Center for Ocular Disease, Eye Institute and School of Optometry, Tianjin Medical University Eye Hospital, Tianjin 300384, China
Wang Sennan now works at Nanyang Second General Hospital, Nanyang 473003, China
Li Zhiqing
Tianjin Key Laboratory of Retinal Functions and Diseases, Tianjin Branch of National Clinical Research Center for Ocular Disease, Eye Institute and School of Optometry, Tianjin Medical University Eye Hospital, Tianjin 300384, China
Zhang Yan
Tianjin Key Laboratory of Retinal Functions and Diseases, Tianjin Branch of National Clinical Research Center for Ocular Disease, Eye Institute and School of Optometry, Tianjin Medical University Eye Hospital, Tianjin 300384, China
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